Processing
rhAmpSeq™ CRISPR Analysis Tool
Flexible, cloud-based interrogation of CRISPR-mediated, double-strand break repair
- Analyze on- and off-target CRISPR edit sites without having bioinformatics expertise
- Characterize Cas 9 or Cas12a (Cpf1) edits (contact us for other nucleases)
- Batch analyze singleplex or multiplex samples (≤500 targets) simultaneously
- Interpret results with supported, validated, versioned workflows
- Streamline analysis with same-day data delivery
- Access with purchase of rhAmpSeq CRISPR Library Kit
* This service is not currently available in China or Russia
Research-friendly UX
An advanced, accessible, and rapid analysis tool for CRISPR results validation.
- Stream or drag-and-drop FASTQ files
- Annotation of repair mechanisms (NHEJ, MMEJ, HDR)
- Interactive graphics with high-resolution downloads
- Secure and GDPR-compliant
Advanced genome editing analysis tool with a friendly graphical user interface
High throughput
Same-day delivery
Advanced yet accessible
Tailored to your research
Using the rhAmpSeq™ CRISPR Analysis Tool
- How to create and manage your account (min 00:04)
- How to upload data (min 01:41)
- How to quality control check multiplex file inputs (min 05:06)
- How to analyze a singleplex experiment (min 06:35)
- How to interpret a singleplex experiment (min 09:04)
- How to analyze multiplex experiment (min 11:53)
- How to interpret multiplex experiment (min 13:40)
Resources
Brochures and flyers
User guides and protocols
Related DECODED articles and webinars
Frequently asked questions
Sample data
Legal and Data Security Documents
“
The tool combines a user-friendly interface with powerful readouts of different types of genome editing including imprecise HDR and MMEJ. The ability to quickly analyze multiplexed reads makes it all the more better. ”
—Eric Aird
Posdoctoral Researcher
ETH Zurich
Posdoctoral Researcher
ETH Zurich